Gene

ydjc

ID

ZDB-GENE-060526-182

Name

YdjC chitooligosaccharide deacetylase homolog

Symbol

ydjc Nomenclature History

Previous Names

si:ch211-89f7.6 (1)

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have magnesium ion binding activity. Orthologous to human YDJC (YdjC chitooligosaccharide deacetylase homolog).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2005

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

eu2481 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ydjc Human Ortholog

No data available

Associated With ydjc Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR006879	Carbohydrate deacetylase YdjC-like
Homologous_superfamily	IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel

Domain Details Per Protein

Protein	Length	Carbohydrate deacetylase YdjC-like	Glycoside hydrolase/deacetylase, beta/alpha-barrel
UniProtKB:A2BIR6 InterPro

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ydjc-201 (1) Ensembl	Ensembl		942 nt	Select Tool ZFIN BLAST
mRNA	ydjc-202 (1) Ensembl	Ensembl		1,062 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations