Gene
prdm8b
- ID
- ZDB-GENE-060526-174
- Name
- PR domain containing 8b
- Symbol
- prdm8b Nomenclature History
- Previous Names
-
- si:ch211-57h10.4
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to have metal ion binding activity. Predicted to be involved in oligodendrocyte development and regulation of transcription, DNA-templated. Predicted to localize to nucleus. Is expressed in adaxial cell and nervous system. Human ortholog(s) of this gene implicated in progressive myoclonus epilepsy 10. Orthologous to human PRDM8 (PR/SET domain 8).
- Genome Resources
- Note
- None
- Comparative Information
- All Expression Data
- 4 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
---|---|---|---|
progressive myoclonus epilepsy 10 | Alliance | ?Epilepsy, progressive myoclonic, 10 | 616640 |
Domain, Family, and Site Summary
Type | InterPro ID | Name |
---|---|---|
Domain | IPR001214 | SET domain |
Domain | IPR013087 | Zinc finger C2H2-type |
Domain | IPR044402 | PRDM8-like, PR/SET domain |
Family | IPR052296 | Transcriptional Repressor and Histone Methyltransferase |
Homologous_superfamily | IPR036236 | Zinc finger C2H2 superfamily |
Homologous_superfamily | IPR046341 | SET domain superfamily |
Domain Details Per Protein
Protein | Length | PRDM8-like, PR/SET domain | SET domain | SET domain superfamily | Transcriptional Repressor and Histone Methyltransferase | Zinc finger C2H2 superfamily | Zinc finger C2H2-type |
---|---|---|---|---|---|---|---|
UniProtKB:A2BG51
|
570 |
Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
---|---|---|---|---|---|
mRNA |
prdm8b-201
(1)
|
Ensembl | 2,502 nt |
Interactions and Pathways
No data available
Plasmids
No data available