Gene

arid3c

ID

ZDB-GENE-060526-12

Name

AT rich interactive domain 3C (BRIGHT-like)

Symbol

arid3c Nomenclature History

Previous Names

si:ch211-113n10.6

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to have DNA binding activity. Predicted to localize to cytoplasm and nucleus. Orthologous to human ARID3C (AT-rich interaction domain 3C).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With arid3c Human Ortholog

No data available

Associated With arid3c Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001606	ARID DNA-binding domain
Domain	IPR023334	REKLES domain
Family	IPR045147	AT-rich interactive domain-containing protein 3
Homologous_superfamily	IPR036431	ARID DNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	ARID DNA-binding domain	ARID DNA-binding domain superfamily	AT-rich interactive domain-containing protein 3	REKLES domain
UniProtKB:A2BEA6 InterPro	570
UniProtKB:A0A0R4IS23 InterPro	599

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	arid3c-201 (1) Ensembl	Ensembl	2,286 nt	Select Tool
ncRNA	arid3c-002 (1) Ensembl	Ensembl	890 nt	Select Tool
ncRNA	arid3c-003 (1) Ensembl	Ensembl	472 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations