Gene

scin

ID

ZDB-GENE-060503-6

Name

scinderin

Symbol

scin Nomenclature History

Previous Names

si:ch211-134n17.3

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have actin filament binding activity and calcium ion binding activity. Predicted to be involved in actin filament severing. Is expressed in brain; cornea; heart; and lens. Orthologous to human SCIN (scinderin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Jia et al., 2007

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With scin Human Ortholog

No data available

Associated With scin Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR007123	Gelsolin-like domain
Family	IPR007122	Villin/Gelsolin
Homologous_superfamily	IPR029006	ADF-H/Gelsolin-like domain superfamily

Domain Details Per Protein

Protein	Length	ADF-H/Gelsolin-like domain superfamily	Gelsolin-like domain	Villin/Gelsolin
UniProtKB:Q1LYK7 InterPro	733

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	scin-201 (1) Ensembl	Ensembl		2,249 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations