Gene
clcn1a
- ID
- ZDB-GENE-060503-333
- Name
- chloride channel, voltage-sensitive 1a
- Symbol
- clcn1a Nomenclature History
- Previous Names
-
- si:dkey-14o18.5 (1)
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to enable voltage-gated chloride channel activity. Predicted to be involved in chloride transport. Predicted to act upstream of or within monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in gill. Human ortholog(s) of this gene implicated in myotonia congenita. Orthologous to human CLCN1 (chloride voltage-gated channel 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Wang et al., 2015
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Becker disease | Alliance | Myotonia congenita, recessive | 255700 |
| Thomsen disease | Alliance | Myotonia congenita, dominant | 160800 |
| Thomsen disease | Alliance | Myotonia levior | 160800 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | CBS domain superfamily | Chloride channel, core | Voltage-gated chloride channel |
|---|---|---|---|---|
|
UniProtKB:A0A8M6YTZ2
|
968 | |||
|
UniProtKB:A0A0R4ID92
|
945 | |||
|
UniProtKB:A0A8M6Z2F5
|
628 | |||
|
UniProtKB:F1Q5M3
|
1011 | |||
|
UniProtKB:A0A8M9PGL5
|
973 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
clcn1a-201
(1)
|
Ensembl | 3,951 nt | ||
| mRNA |
clcn1a-202
(1)
|
Ensembl | 2,923 nt |
Interactions and Pathways
No data available
Plasmids