Gene

znf516

ID

ZDB-GENE-060503-194

Name

zinc finger protein 516

Symbol

znf516 Nomenclature History

Previous Names

si:ch211-135j15.1

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to have metal ion binding activity and nucleic acid binding activity. Orthologous to human ZNF516 (zinc finger protein 516).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Diotel et al., 2015

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With znf516 Human Ortholog

No data available

Associated With znf516 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR013087	Zinc finger C2H2-type
Family	IPR051967	Krueppel C2H2-type Zinc-Finger Domain-Containing Protein
Homologous_superfamily	IPR036236	Zinc finger C2H2 superfamily

Domain Details Per Protein

Protein	Length	Krueppel C2H2-type Zinc-Finger Domain-Containing Protein	Zinc finger C2H2 superfamily	Zinc finger C2H2-type
UniProtKB:Q1L941 InterPro	1084
UniProtKB:A0A8M2BH95 InterPro	1040

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	znf516-201 (1) Ensembl	Ensembl		3,972 nt	Select Tool
mRNA	znf516-202 (1) Ensembl	Ensembl		3,255 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations