Gene

gpnmb

ID
ZDB-GENE-060503-106
Name
glycoprotein (transmembrane) nmb
Symbol
gpnmb Nomenclature History
Previous Names
  • si:ch211-155k24.6
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to localize to integral component of plasma membrane. Human ortholog(s) of this gene implicated in primary cutaneous amyloidosis. Orthologous to human GPNMB (glycoprotein nmb).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Lelieveld et al., 2022
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With gpnmb Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
primary localized cutaneous amyloidosis 3 Alliance Amyloidosis, primary localized cutaneous, 3 617920
Associated With gpnmb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000601 PKD domain
Domain IPR046846 PKAT, KLD domain
Family IPR045219 PKD- and KLD-Associated Transmembrane
Homologous_superfamily IPR013783 Immunoglobulin-like fold
Homologous_superfamily IPR035986 PKD domain superfamily
Domain Details Per Protein
Protein Length Immunoglobulin-like fold PKAT, KLD domain PKD- and KLD-Associated Transmembrane PKD domain PKD domain superfamily
UniProtKB:A0A8N7TB94 621
UniProtKB:E7F7J7 627
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
aberrant processed transcript gpnmb-203 (1) Ensembl 1,973 nt
mRNA gpnmb-201 (1) Ensembl 6,461 nt
mRNA gpnmb-202 (1) Ensembl 1,994 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations