Gene

barhl1b

ID
ZDB-GENE-060118-2
Name
BarH-like homeobox 1b
Symbol
barhl1b Nomenclature History
Previous Names
  • barhl1.1
  • barhl1
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in several processes, including nervous system development; regulation of transcription by RNA polymerase II; and tissue development. Predicted to localize to nucleus. Is expressed in brain; neural plate; and retina. Orthologous to human BARHL1 (BarH like homeobox 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With barhl1b Human Ortholog
No data available
Associated With barhl1b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017970 Homeobox, conserved site
Domain IPR001356 Homeodomain
Domain IPR020479 Homeodomain, metazoa
Family IPR050848 Homeobox domain-containing transcription factors
Homologous_superfamily IPR009057 Homedomain-like superfamily
Domain Details Per Protein
Protein Length Homedomain-like superfamily Homeobox, conserved site Homeobox domain-containing transcription factors Homeodomain Homeodomain, metazoa
UniProtKB:Q53B64 323
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA barhl1b-201 (1) Ensembl 1,146 nt
ncRNA barhl1b-002 (1) Ensembl 855 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations