Gene
spty2d1
- ID
- ZDB-GENE-050522-212
- Name
- SPT2 chromatin protein domain containing 1
- Symbol
- spty2d1 Nomenclature History
- Previous Names
-
- wu:fb01d08
- zgc:111826
- Type
- protein_coding_gene
- Location
- Chr: 25 Mapping Details/Browsers
- Description
- Predicted to have DNA binding activity; RNA polymerase I core binding activity; and histone binding activity. Predicted to be involved in nucleosome organization; regulation of chromatin assembly; and regulation of transcription, DNA-templated. Predicted to localize to nucleolus. Is expressed in axial mesoderm; hatching gland; notochord; and polster. Orthologous to human SPTY2D1 (SPT2 chromatin protein domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:111826 (14 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR013256 | Chromatin SPT2 |
Domain Details Per Protein
| Protein | Length | Chromatin SPT2 |
|---|---|---|
|
UniProtKB:A0A8M6YWI0
|
629 | |
|
UniProtKB:Q6DGN6
|
629 | |
|
UniProtKB:F1R3H5
|
632 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
spty2d1-201
(1)
|
Ensembl | 6,717 nt | ||
| mRNA |
spty2d1-202
(1)
|
Ensembl | 2,876 nt | ||
| mRNA |
spty2d1-203
(1)
|
Ensembl | 760 nt | ||
| ncRNA |
spty2d1-003
(1)
|
Ensembl | 866 nt |
Interactions and Pathways
No data available
Plasmids
No data available