Gene

pacsin1a

ID
ZDB-GENE-050522-155
Name
protein kinase C and casein kinase substrate in neurons 1a
Symbol
pacsin1a Nomenclature History
Previous Names
  • zgc:109968
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have cytoskeletal protein binding activity and phospholipid binding activity. Predicted to be involved in several processes, including generation of neurons; plasma membrane tubulation; and regulation of endocytosis. Predicted to localize to cytoskeleton; endosome; and plasma membrane. Is expressed in nervous system. Orthologous to human PACSIN1 (protein kinase C and casein kinase substrate in neurons 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pacsin1a Human Ortholog
No data available
Associated With pacsin1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001060 FCH domain
Domain IPR001452 SH3 domain
Domain IPR031160 F-BAR domain
Domain IPR035743 PACSIN1/PACSIN2, SH3 domain
Homologous_superfamily IPR027267 AH/BAR domain superfamily
Homologous_superfamily IPR036028 SH3-like domain superfamily
Domain Details Per Protein
Protein Length AH/BAR domain superfamily F-BAR domain FCH domain PACSIN1/PACSIN2, SH3 domain SH3 domain SH3-like domain superfamily
UniProtKB:A0A8M9P544 260
UniProtKB:A0A2R9YJM4 438
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pacsin1a-201 (1) Ensembl 1,053 nt
mRNA pacsin1a-202 (1) Ensembl 790 nt
mRNA pacsin1a-204 (1) Ensembl 1,415 nt
mRNA pacsin1a-205 (1) Ensembl 650 nt
mRNA pacsin1a-206 (1) Ensembl 3,374 nt
ncRNA pacsin1a-002 (1) Ensembl 882 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations