Gene

syt5b

ID
ZDB-GENE-050522-134
Name
synaptotagmin Vb
Symbol
syt5b Nomenclature History
Previous Names
  • zgc:109988 (1)
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Predicted to have several functions, including calcium ion binding activity; phospholipid binding activity; and syntaxin binding activity. Predicted to be involved in cellular response to calcium ion; regulation of secretion by cell; and synaptic vesicle cycle. Predicted to localize to axon; plasma membrane; and secretory vesicle. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 7. Is expressed in diencephalon; epiphysis; retina; and telencephalon. Orthologous to several human genes including SYT2 (synaptotagmin 2).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With syt5b Human Ortholog
No data available
Associated With syt5b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000008 C2 domain
Domain IPR001565 Synaptotagmin
Homologous_superfamily IPR035892 C2 domain superfamily
Domain Details Per Protein
Protein Length C2 domain C2 domain superfamily Synaptotagmin
UniProtKB:A0A2R8QDJ8 413
UniProtKB:F1QCC9 446
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA syt5b-201 (1) Ensembl 1,957 nt
mRNA syt5b-202 (1) Ensembl 2,155 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations