Gene

tap1

ID
ZDB-GENE-050517-43
Name
transporter 1, ATP-binding cassette, sub-family B (MDR/TAP)
Symbol
tap1 Nomenclature History
Previous Names
  • abcb2 (1)
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have ATPase-coupled peptide antigen transmembrane transporter activity; MHC class I protein binding activity; and TAP2 binding activity. Predicted to be involved in peptide transport and transmembrane transport. Predicted to localize to MHC class I peptide loading complex. Human ortholog(s) of this gene implicated in several diseases, including MHC class I deficiency; bone inflammation disease (multiple); bronchial disease (multiple); diffuse scleroderma; and lung disease (multiple). Orthologous to human TAP1 (transporter 1, ATP binding cassette subfamily B member).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from Xu et al., 2017
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tap1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
MHC class I deficiency Alliance MHC class I deficiency 1 604571
Associated With tap1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017871 ABC transporter-like, conserved site
Domain IPR003439 ABC transporter-like, ATP-binding domain
Domain IPR003593 AAA+ ATPase domain
Domain IPR011527 ABC transporter type 1, transmembrane domain
Family IPR039421 Type 1 protein exporter
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR036640 ABC transporter type 1, transmembrane domain superfamily
Domain Details Per Protein
Protein Length AAA+ ATPase domain ABC transporter-like, ATP-binding domain ABC transporter-like, conserved site ABC transporter type 1, transmembrane domain ABC transporter type 1, transmembrane domain superfamily P-loop containing nucleoside triphosphate hydrolase Type 1 protein exporter
UniProtKB:E7F8A9 731
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tap1-201 (1) Ensembl 2,577 nt
mRNA tap1-202 (1) Ensembl 2,211 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations