Gene

abch1

ID
ZDB-GENE-050517-42
Name
ATP-binding cassette, sub-family H, member 1
Symbol
abch1 Nomenclature History
Previous Names
  • si:ch211-154e15.12 (1)
  • si:dkey-148f10.7 (1)
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have ATP binding activity and ATPase activity. Predicted to be involved in transmembrane transport. Predicted to localize to ATP-binding activity cassette (ABC) transporter complex. Is expressed in brain; gill; liver; pleuroperitoneal region; and skeletal muscle.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Popovic et al., 2010
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With abch1 Human Ortholog
No data available
Associated With abch1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017871 ABC transporter-like, conserved site
Domain IPR003439 ABC transporter-like, ATP-binding domain
Domain IPR003593 AAA+ ATPase domain
Domain IPR013525 ABC-2 type transporter, transmembrane domain
Domain IPR047817 ABC-2 type transporter, transmembrane domain, bacterial-type
Family IPR000412 ABC-2 transporter
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length AAA+ ATPase domain ABC-2 transporter ABC-2 type transporter, transmembrane domain ABC-2 type transporter, transmembrane domain, bacterial-type ABC transporter-like, ATP-binding domain ABC transporter-like, conserved site P-loop containing nucleoside triphosphate hydrolase
UniProtKB:A0A8M9PVH7 713
UniProtKB:A0A8M9PCT3 688
UniProtKB:A0A8N7T5J6 713
UniProtKB:A0A8M2B4Y5 688
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA abch1-201 (1) Ensembl 2,013 nt
mRNA abch1-202 (1) Ensembl 2,401 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations