Gene

lrrc39

ID
ZDB-GENE-050417-279
Name
leucine rich repeat containing 39
Symbol
lrrc39 Nomenclature History
Previous Names
  • myomasp (1)
  • zgc:112088
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Involved in cardiac muscle tissue morphogenesis; heart contraction; and sarcomere organization. Predicted to localize to M band. Is expressed in adaxial cell; floor plate; myotome; pectoral fin musculature; and somite. Orthologous to human LRRC39 (leucine rich repeat containing 39).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With lrrc39 Human Ortholog
No data available
Associated With lrrc39 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR050715 Leucine-rich repeat and signaling effector domain-containing protein
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Leucine-rich repeat Leucine-rich repeat and signaling effector domain-containing protein Leucine-rich repeat domain superfamily Leucine-rich repeat, typical subtype
UniProtKB:A0A8M9PV96 343
UniProtKB:F1R6I3 343
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA lrrc39-201 (1) Ensembl 1,506 nt
mRNA lrrc39-202 (1) Ensembl 1,301 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations