Gene

zgc:113436

ID
ZDB-GENE-050220-6
Name
zgc:113436
Symbol
zgc:113436 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have nucleic acid binding activity. Predicted to be involved in DNA integration. Orthologous to human GIN1 (gypsy retrotransposon integrase 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With zgc:113436 Human Ortholog
No data available
Associated With zgc:113436 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001584 Integrase, catalytic core
Domain IPR041588 Integrase zinc-binding domain
Family IPR052160 Gypsy Retrotransposon Integrase-like
Homologous_superfamily IPR012337 Ribonuclease H-like superfamily
Homologous_superfamily IPR036397 Ribonuclease H superfamily
Domain Details Per Protein
Protein Length Gypsy Retrotransposon Integrase-like Integrase, catalytic core Integrase zinc-binding domain Ribonuclease H-like superfamily Ribonuclease H superfamily
UniProtKB:A0A0R4II69 329
UniProtKB:Q5EB08 208
UniProtKB:A3KGZ3 433
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA zgc:113436-201 (1) Ensembl 2,170 nt
mRNA zgc:113436-203 (1) Ensembl 1,861 nt
mRNA zgc:113436-204 (1) Ensembl 3,729 nt
ncRNA zgc:113436-002 (1) Ensembl 571 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations