Gene

tdrd5

ID
ZDB-GENE-050208-502
Name
tudor domain containing 5
Symbol
tdrd5 Nomenclature History
Previous Names
  • si:dkey-171o17.7
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to be involved in DNA methylation involved in gamete generation; P granule organization; and spermatid development. Predicted to localize to chromatoid body and pi-body. Orthologous to human TDRD5 (tudor domain containing 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Strasser et al., 2008
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tdrd5 Human Ortholog
No data available
Associated With tdrd5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR002999 Tudor domain
Domain IPR025605 OST-HTH/LOTUS domain
Domain IPR037982 TDRD5, second LOTUS domain
Family IPR050621 Tudor domain-containing
Homologous_superfamily IPR035437 SNase-like, OB-fold superfamily
Homologous_superfamily IPR041966 LOTUS-like domain
Domain Details Per Protein
Protein Length LOTUS-like domain OST-HTH/LOTUS domain SNase-like, OB-fold superfamily TDRD5, second LOTUS domain Tudor domain Tudor domain-containing
UniProtKB:A0A8M9PDW1 908
UniProtKB:Q1L981 905
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tdrd5-201 (1) Ensembl 3,268 nt
mRNA tdrd5-202 (1) Ensembl 3,999 nt
mRNA tdrd5-203 (1) Ensembl 3,568 nt
mRNA tdrd5-204 (1) Ensembl 4,083 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations