Gene

nfia

ID
ZDB-GENE-050208-501
Name
nuclear factor I/A
Symbol
nfia Nomenclature History
Previous Names
  • si:ch211-88d2.2
  • wu:fq27e07
  • zgc:158351
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in negative regulation of transcription by RNA polymerase II and positive regulation of transcription by RNA polymerase II. Predicted to localize to nucleus. Human ortholog(s) of this gene implicated in NFIA-related disorder. Is expressed in brain. Orthologous to human NFIA (nuclear factor I A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With nfia Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
NFIA-related disorder Alliance Brain malformations with or without urinary tract defects 613735
Associated With nfia Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR019739 CTF transcription factor/nuclear factor 1, conserved site
Domain IPR003619 MAD homology 1, Dwarfin-type
Domain IPR019548 CTF transcription factor/nuclear factor 1, N-terminal
Domain IPR020604 CTF transcription factor/nuclear factor 1, DNA-binding domain
Family IPR000647 CTF transcription factor/nuclear factor 1
Domain Details Per Protein
Protein Length CTF transcription factor/nuclear factor 1 CTF transcription factor/nuclear factor 1, conserved site CTF transcription factor/nuclear factor 1, DNA-binding domain CTF transcription factor/nuclear factor 1, N-terminal MAD homology 1, Dwarfin-type
UniProtKB:A0A8M3B5H7 527
UniProtKB:A1A5X3 481
UniProtKB:A0A8M3AM79 570
UniProtKB:A0A8M3AUN3 587
UniProtKB:A0A8M3AUN8 564
UniProtKB:A0A8M3AM86 544
UniProtKB:A0A8M3AMZ3 567
UniProtKB:A0A8M3AXN2 567
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA nfia-201 (1) Ensembl 2,852 nt
mRNA nfia-202 (1) Ensembl 1,395 nt
mRNA nfia-203 (1) Ensembl 3,353 nt
mRNA nfia-204 (1) Ensembl 782 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations