Gene

xpot

ID
ZDB-GENE-041210-4
Name
exportin, tRNA (nuclear export receptor for tRNAs)
Symbol
xpot Nomenclature History
Previous Names
  • si:ch211-286m4.4
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
Predicted to have Ran GTPase binding activity and tRNA binding activity. Predicted to be involved in tRNA re-export from nucleus. Predicted to localize to cytoplasm; nuclear matrix; and nuclear pore. Is expressed in female organism. Orthologous to human XPOT (exportin for tRNA).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Newman et al., 2019
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With xpot Human Ortholog
No data available
Associated With xpot Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR013598 Exportin-1/Importin-beta-like
Domain IPR045546 Exportin-T, C-terminal domain
Family IPR040017 Exportin-T
Homologous_superfamily IPR011989 Armadillo-like helical
Homologous_superfamily IPR016024 Armadillo-type fold
Domain Details Per Protein
Protein Length Armadillo-like helical Armadillo-type fold Exportin-1/Importin-beta-like Exportin-T Exportin-T, C-terminal domain
UniProtKB:A0A8M9Q5X2 974
UniProtKB:A5PLB1 88
UniProtKB:Q5SPJ8 961
UniProtKB:A0A8M1N9D2 971
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA xpot-201 (1) Ensembl 3,653 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations