Gene

pcdh1gc5

ID
ZDB-GENE-041118-16
Name
protocadherin 1 gamma c 5
Symbol
pcdh1gc5 Nomenclature History
Previous Names
  • DrPcdh1g23 (1)
  • pcdh1g27 (1)
  • pcdh1gc5-A (1)
  • pcdh1gc5-sCP1-2 (1)
  • pcdh1gc5-sCP1 (1)
  • pcdh1gc5-sCP2 (1)
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane. Is expressed in brain and female organism.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
2 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pcdh1gc5 Human Ortholog
No data available
Associated With pcdh1gc5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020894 Cadherin conserved site
Domain IPR002126 Cadherin-like
Domain IPR013164 Cadherin, N-terminal
Domain IPR031904 Cadherin, C-terminal catenin-binding domain
Family IPR050174 Protocadherin/Cadherin-related Cell Adhesion
Homologous_superfamily IPR015919 Cadherin-like superfamily
Domain Details Per Protein
Protein Length Cadherin conserved site Cadherin, C-terminal catenin-binding domain Cadherin-like Cadherin-like superfamily Cadherin, N-terminal Protocadherin/Cadherin-related Cell Adhesion
UniProtKB:I6LC16 948
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pcdh1gc5-201 (1) Ensembl 4,345 nt
mRNA pcdh1gc5-202 (1) Ensembl 4,451 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations