Gene

cenpf

ID
ZDB-GENE-041111-205
Name
centromere protein F
Symbol
cenpf Nomenclature History
Previous Names
  • im:7140452
  • im:7144238
  • im:7154719 (1)
  • im:7156761
  • si:ch211-152h14.2
Type
protein_coding_gene
Location
Chr: 17 Mapping Details/Browsers
Description
Predicted to have dynein complex binding activity; protein homodimerization activity; and transcription factor binding activity. Involved in animal organ development and cilium assembly. Human ortholog(s) of this gene implicated in Stromme syndrome. Is expressed in proliferative region. Orthologous to human CENPF (centromere protein F).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
16 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Waters et al., 2015
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cenpf Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Stromme syndrome Alliance Stromme syndrome 243605
Associated With cenpf Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR018302 Kinetochore protein Cenp-F/LEK1, Rb protein-binding domain
Domain IPR018463 Centromere protein Cenp-F, N-terminal
Domain IPR019513 Centromere protein Cenp-F, leucine-rich repeat-containing domain
Family IPR043513 Centromere protein Cenp-F
Domain Details Per Protein
Protein Length Centromere protein Cenp-F Centromere protein Cenp-F, leucine-rich repeat-containing domain Centromere protein Cenp-F, N-terminal Kinetochore protein Cenp-F/LEK1, Rb protein-binding domain
UniProtKB:F1Q7X5 2708
UniProtKB:A0A286Y8J7 2675
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA cenpf-201 (1) Ensembl 9,162 nt
mRNA cenpf-202 (1) Ensembl 11,020 nt
mRNA cenpf-203 (1) Ensembl 11,212 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations