Gene

snip1

ID
ZDB-GENE-041026-3
Name
Smad nuclear interacting protein
Symbol
snip1 Nomenclature History
Previous Names
None
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to have mRNA binding activity. Involved in mRNA splicing, via spliceosome. Predicted to localize to nucleus. Is expressed in several structures, including blastodisc; fourth ventricle; notochord; otic vesicle; and pectoral fin bud. Orthologous to human SNIP1 (Smad nuclear interacting protein 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Fernandez et al., 2018
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With snip1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Neurodevelopmental disorder with hypotonia, craniofacial abnormalities, and seizures 614501
Associated With snip1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000253 Forkhead-associated (FHA) domain
Family IPR050923 Cellular Process Regulator and RNA Processing Protein
Homologous_superfamily IPR008984 SMAD/FHA domain superfamily
Domain Details Per Protein
Protein Length Cellular Process Regulator and RNA Processing Protein Forkhead-associated (FHA) domain SMAD/FHA domain superfamily
UniProtKB:Q4V8W8 374
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA snip1-201 (1) Ensembl 1,776 nt
mRNA snip1-202 (1) Ensembl 804 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations