Gene

epyc

ID
ZDB-GENE-041008-9
Name
epiphycan
Symbol
epyc Nomenclature History
Previous Names
  • dspg3 (1)
  • dspg3l (1)
  • im:6901189
  • si:dkeyp-38g8.4
  • wu:fb48c08
  • zgc:110596
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Description
Is expressed in cartilage element; notochord; otic vesicle; and splanchnocranium. Orthologous to human EPYC (epiphycan).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With epyc Human Ortholog
No data available
Associated With epyc Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000372 Leucine-rich repeat N-terminal domain
Family IPR043547 Mimecan/Epiphycan/Opticin
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Leucine-rich repeat Leucine-rich repeat domain superfamily Leucine-rich repeat N-terminal domain Leucine-rich repeat, typical subtype Mimecan/Epiphycan/Opticin
UniProtKB:B0S5X0 712
UniProtKB:A0A8M1P5N0 321
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA epyc-201 (1) Ensembl 1,850 nt
mRNA epyc-202 (1) Ensembl 6,308 nt
mRNA epyc-203 (1) Ensembl 2,226 nt
ncRNA epyc-003 (1) Ensembl 579 nt
ncRNA epyc-004 (1) Ensembl 893 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations