Gene

caskin2

ID

ZDB-GENE-041001-137

Name

CASK interacting protein 2

Symbol

caskin2 Nomenclature History

Previous Names

si:ch211-119c20.2

Type

protein_coding_gene

Location

Chr: 12 Mapping Details/Browsers

Description

Predicted to localize to membrane. Orthologous to human CASKIN2 (CASK interacting protein 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With caskin2 Human Ortholog

No data available

Associated With caskin2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001452	SH3 domain
Domain	IPR001660	Sterile alpha motif domain
Domain	IPR032117	Caskin, C-terminal
Domain	IPR032232	Caskin-1, CASK-interaction domain
Domain	IPR035497	Caskin1/2, SAM repeat 1
Domain	IPR035498	Caskin1/2, SAM repeat 2
Domain	IPR035499	Caskin2, SH3 domain
Family	IPR033635	Ankyrin repeat and SAM domain-containing protein 1/Caskin
Homologous_superfamily	IPR013761	Sterile alpha motif/pointed domain superfamily
Homologous_superfamily	IPR036028	SH3-like domain superfamily
Homologous_superfamily	IPR036770	Ankyrin repeat-containing domain superfamily
Repeat	IPR002110	Ankyrin repeat

Domain Details Per Protein

Protein	Length	Ankyrin repeat	Ankyrin repeat and SAM domain-containing protein 1/Caskin	Ankyrin repeat-containing domain superfamily	Caskin1/2, SAM repeat 1	Caskin1/2, SAM repeat 2	Caskin-1, CASK-interaction domain	Caskin2, SH3 domain	Caskin, C-terminal	SH3 domain	SH3-like domain superfamily	Sterile alpha motif domain	Sterile alpha motif/pointed domain superfamily
UniProtKB:A0A8M9QEN7 InterPro	1227
UniProtKB:A0A8M3B4P2 InterPro	1294
UniProtKB:A0A8M3B7H5 InterPro	1308
UniProtKB:A0A8M3BE80 InterPro	1283
UniProtKB:A0A8M3AYG7 InterPro	1284

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	caskin2-202 (1) Ensembl	Ensembl		3,813 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-119c20.2-202 (1) Ensembl	Ensembl		5,031 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations