Gene

sdf2l1

ID
ZDB-GENE-040808-46
Name
stromal cell-derived factor 2-like 1
Symbol
sdf2l1 Nomenclature History
Previous Names
  • wu:fc55b04
  • zgc:92449
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have dolichyl-phosphate-mannose-protein mannosyltransferase activity. Predicted to be involved in ER-associated misfolded protein catabolic process and protein O-linked mannosylation. Predicted to localize to endoplasmic reticulum membrane. Is expressed in hatching gland; nervous system; notochord; otic vesicle; and polster. Orthologous to human SDF2L1 (stromal cell derived factor 2 like 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With sdf2l1 Human Ortholog
No data available
Associated With sdf2l1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR016093 MIR motif
Homologous_superfamily IPR036300 Mir domain superfamily
Domain Details Per Protein
Protein Length Mir domain superfamily MIR motif
UniProtKB:A2BIR7 218
UniProtKB:Q6AZB5 211
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA sdf2l1-201 (1) Ensembl 1,513 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations