Gene

clmnb

ID
ZDB-GENE-040801-124
Name
calmin b
Symbol
clmnb Nomenclature History
Previous Names
  • im:7149399
  • zgc:100997
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have actin filament binding activity. Predicted to be involved in actin filament bundle assembly and actin filament network formation. Predicted to localize to actin filament; actin filament bundle; and cytoplasm.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With clmnb Human Ortholog
No data available
Associated With clmnb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR001589 Actinin-type actin-binding domain, conserved site
Domain IPR001715 Calponin homology domain
Domain IPR047826 Calmin, second calponin homology domain
Domain IPR047827 Calmin, first calponin homology domain
Family IPR052403 LINC complex-associated protein
Homologous_superfamily IPR036872 CH domain superfamily
Domain Details Per Protein
Protein Length Actinin-type actin-binding domain, conserved site Calmin, first calponin homology domain Calmin, second calponin homology domain Calponin homology domain CH domain superfamily LINC complex-associated protein
UniProtKB:A0A8M3AT29 303
UniProtKB:A0A2R8QQ29 660
UniProtKB:Q6DBX6 687
UniProtKB:A0A8M9PSL8 377
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA zgc:100997-201 (1) Ensembl 2,373 nt
mRNA zgc:100997-202 (1) Ensembl 3,269 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations