Gene

zgc:91944

ID

ZDB-GENE-040718-417

Name

zgc:91944

Symbol

zgc:91944 Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 19 Mapping Details/Browsers

Description

Predicted to enable double-stranded telomeric DNA binding activity. Predicted to act upstream of or within positive regulation of DNA-templated transcription. Predicted to be active in nucleus. Is expressed in lateral line ganglion and telencephalon.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

8 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:91944 (7 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With zgc:91944 Human Ortholog

No data available

Associated With zgc:91944 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001356	Homeodomain
Domain	IPR001387	Cro/C1-type helix-turn-helix domain
Domain	IPR006899	Hepatocyte nuclear factor 1, N-terminal
Domain	IPR044866	HNF-1, dimerization domain
Domain	IPR044869	HNF-1, POU-specific (POUs) atypical domain
Family	IPR040363	Homeobox-containing protein 1
Homologous_superfamily	IPR009057	Homedomain-like superfamily
Homologous_superfamily	IPR010982	Lambda repressor-like, DNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	Cro/C1-type helix-turn-helix domain	Hepatocyte nuclear factor 1, N-terminal	HNF-1, dimerization domain	HNF-1, POU-specific (POUs) atypical domain	Homedomain-like superfamily	Homeobox-containing protein 1	Homeodomain	Lambda repressor-like, DNA-binding domain superfamily
UniProtKB:A0A8M3AKA5 InterPro	427
UniProtKB:Q6DG34 InterPro	469
UniProtKB:F1RAA7 InterPro	469

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	zgc:91944-201 (1) Ensembl	Ensembl	3,022 nt	Select Tool ZFIN BLAST
mRNA	zgc:91944-202 (1) Ensembl	Ensembl	3,127 nt	Select Tool ZFIN BLAST
mRNA	zgc:91944-203 (1) Ensembl	Ensembl	798 nt	Select Tool ZFIN BLAST
mRNA	zgc:91944-204 (1) Ensembl	Ensembl	2,962 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations