Gene

pacsin3

ID
ZDB-GENE-040426-984
Name
protein kinase C and casein kinase substrate in neurons 3
Symbol
pacsin3 Nomenclature History
Previous Names
  • fa11d03
  • fj67e09
  • wu:fa11d03 (1)
  • wu:fj67e09 (1)
  • wu:fq16a06 (1)
  • zgc:56324
Type
protein_coding_gene
Location
Chr: 7 Mapping Details/Browsers
Description
Predicted to have cytoskeletal protein binding activity and phospholipid binding activity. Involved in notochord cell differentiation and notochord formation. Localizes to plasma membrane. Is expressed in several structures, including endoderm; epidermis; intestinal bulb primordium; sensory system; and ventricular zone. Orthologous to human PACSIN3 (protein kinase C and casein kinase substrate in neurons 3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
11 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Edeling et al., 2009
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pacsin3 Human Ortholog
No data available
Associated With pacsin3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001060 FCH domain
Domain IPR001452 SH3 domain
Domain IPR031160 F-BAR domain
Homologous_superfamily IPR027267 AH/BAR domain superfamily
Homologous_superfamily IPR036028 SH3-like domain superfamily
Domain Details Per Protein
Protein Length AH/BAR domain superfamily F-BAR domain FCH domain SH3 domain SH3-like domain superfamily
UniProtKB:Q7ZUY8 377
UniProtKB:A0A8M3B1H5 516
UniProtKB:A0A8M9QGQ8 458
UniProtKB:A0A8M2BE23 435
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pacsin3-201 (1) Ensembl 2,581 nt
mRNA pacsin3-202 (1) Ensembl 2,629 nt
mRNA pacsin3-203 (1) Ensembl 307 nt
mRNA pacsin3-204 (1) Ensembl 283 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations