Gene

sh3glb2b

ID

ZDB-GENE-040426-833

Name

SH3-domain GRB2-like endophilin B2b

Symbol

sh3glb2b Nomenclature History

Previous Names

sh3glb2
zgc:55887

Type

protein_coding_gene

Location

Chr: 5 Mapping Details/Browsers

Description

Predicted to localize to cytoplasm. Is expressed in central nervous system; eye; immature eye; lens; and solid lens vesicle. Orthologous to human SH3GLB2 (SH3 domain containing GRB2 like, endophilin B2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

5 figures from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:55887 (8 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With sh3glb2b Human Ortholog

No data available

Associated With sh3glb2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001452	SH3 domain
Domain	IPR004148	BAR domain
Domain	IPR035640	Endophilin B2, SH3 domain
Family	IPR050384	Endophilin/SH3RF
Homologous_superfamily	IPR027267	AH/BAR domain superfamily
Homologous_superfamily	IPR036028	SH3-like domain superfamily

Domain Details Per Protein

Protein	Length	AH/BAR domain superfamily	BAR domain	Endophilin B2, SH3 domain	Endophilin/SH3RF	SH3 domain	SH3-like domain superfamily
UniProtKB:A2CEP2 InterPro	402
UniProtKB:A0A8M9Q8B5 InterPro	398
UniProtKB:A0A8M9Q307 InterPro	377
UniProtKB:Q802U5 InterPro	373
UniProtKB:A0A8M9QDN1 InterPro	417
UniProtKB:A0A8M9Q303 InterPro	421
UniProtKB:A0A8M9PX86 InterPro	385
UniProtKB:A0A2R8QMQ9 InterPro	394
UniProtKB:A0A2R8Q0C3 InterPro	406

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	sh3glb2b-201 (1) Ensembl	Ensembl	1,920 nt	Select Tool
mRNA	sh3glb2b-202 (1) Ensembl	Ensembl	798 nt	Select Tool
mRNA	sh3glb2b-203 (1) Ensembl	Ensembl	1,257 nt	Select Tool
mRNA	sh3glb2b-205 (1) Ensembl	Ensembl	1,201 nt	Select Tool
mRNA	sh3glb2b-206 (1) Ensembl	Ensembl	5,483 nt	Select Tool ZFIN BLAST
mRNA	sh3glb2b-207 (1) Ensembl	Ensembl	5,432 nt	Select Tool ZFIN BLAST
mRNA	sh3glb2b-208 (1) Ensembl	Ensembl	5,447 nt	Select Tool ZFIN BLAST
ncRNA	sh3glb2b-004 (1) Ensembl	Ensembl	851 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations