Gene

vil1

ID

ZDB-GENE-040426-799

Name

villin 1

Symbol

vil1 Nomenclature History

Previous Names

vil1l
zgc:55779 (1)

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to have actin filament binding activity; calcium ion binding activity; and phosphatidylinositol-4,5-bisphosphate binding activity. Predicted to be involved in actin filament capping; actin filament severing; and actin nucleation. Is expressed in gut epithelium; intestinal epithelium; and intestine. Orthologous to human VIL1 (villin 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

5 figures from 5 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With vil1 Human Ortholog

No data available

Associated With vil1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003128	Villin headpiece
Domain	IPR007123	Gelsolin-like domain
Family	IPR007122	Villin/Gelsolin
Homologous_superfamily	IPR029006	ADF-H/Gelsolin-like domain superfamily
Homologous_superfamily	IPR036180	Gelsolin-like domain superfamily
Homologous_superfamily	IPR036886	Villin headpiece domain superfamily

Domain Details Per Protein

Protein	Length	ADF-H/Gelsolin-like domain superfamily	Gelsolin-like domain	Gelsolin-like domain superfamily	Villin/Gelsolin	Villin headpiece	Villin headpiece domain superfamily
UniProtKB:F1QVU3 InterPro	834
UniProtKB:Q802V3 InterPro	834

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	vil1-201 (1) Ensembl	Ensembl	3,265 nt	Select Tool ZFIN BLAST
mRNA	vil1-202 (1) Ensembl	Ensembl	802 nt	Select Tool ZFIN BLAST
mRNA	vil1-205 (1) Ensembl	Ensembl	6,564 nt	Select Tool ZFIN BLAST
mRNA	vil1-206 (1) Ensembl	Ensembl	6,645 nt	Select Tool ZFIN BLAST
mRNA	vil1-207 (1) Ensembl	Ensembl	2,522 nt	Select Tool ZFIN BLAST
ncRNA	vil1-002 (1) Ensembl	Ensembl	554 nt	Select Tool ZFIN BLAST
ncRNA	vil1-004 (1) Ensembl	Ensembl	542 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations