Gene
ddx39ab
- ID
- ZDB-GENE-040426-2902
- Name
- DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
- Symbol
- ddx39ab Nomenclature History
- Previous Names
-
- ddx39
- ddx39b
- fc16a02
- wu:fc16a02
- zgc:55433
- zgc:85646
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Description
- Exhibits RNA binding activity. Involved in several processes, including histone H3-K4 methylation; lens fiber cell differentiation; and mRNA splicing, via spliceosome. Predicted to localize to transcription export complex. Is expressed in several structures, including eye; heart tube; immature eye; liver; and trunk musculature. Orthologous to human DDX39A (DExD-box helicase 39A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55433 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 7 figures from Zhang et al., 2018
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR011545 | DEAD/DEAH box helicase domain |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR014014 | RNA helicase, DEAD-box type, Q motif |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Length | DEAD/DEAH box helicase domain | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | RNA helicase, DEAD-box type, Q motif |
|---|---|---|---|---|---|---|
|
UniProtKB:Q803W0
|
427 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ddx39ab-201
(1)
|
Ensembl | 1,587 nt |
Interactions and Pathways
No data available
Plasmids
No data available