Gene
mtrex
- ID
- ZDB-GENE-040426-2854
- Name
- Mtr4 exosome RNA helicase
- Symbol
- mtrex Nomenclature History
- Previous Names
-
- mtrex
- julie (1)
- skiv2l2
- wu:fd11a05
- zgc:63838
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to have RNA helicase activity. Involved in fin regeneration and positive regulation of cell division. Predicted to localize to nucleus. Is expressed in blastomere; nervous system; and pectoral fin. Orthologous to human MTREX (Mtr4 exosome RNA helicase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Yang et al., 2007
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Yang et al., 2007
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR011545 | DEAD/DEAH box helicase domain |
| Domain | IPR012961 | ATP-dependent RNA helicase Ski2/MTR4, C-terminal |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR025696 | Exosome RNA helicase MTR4-like, beta-barrel domain |
| Domain | IPR048392 | Exosome RNA helicase MTR4-like, stalk |
| Family | IPR016438 | ATP-dependent RNA helicase SKI2-like |
| Family | IPR050699 | RNA/DNA Helicase |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Length | ATP-dependent RNA helicase SKI2-like | ATP-dependent RNA helicase Ski2/MTR4, C-terminal | DEAD/DEAH box helicase domain | Exosome RNA helicase MTR4-like, beta-barrel domain | Exosome RNA helicase MTR4-like, stalk | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | RNA/DNA Helicase |
|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q6P7X6
|
1034 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
mtrex-201
(1)
|
Ensembl | 3,333 nt | ||
| ncRNA |
skiv2l2-002
(1)
|
Ensembl | 535 nt |
Interactions and Pathways
No data available
Plasmids
No data available