Gene
mtrex
- ID
- ZDB-GENE-040426-2854
- Name
- Mtr4 exosome RNA helicase
- Symbol
- mtrex Nomenclature History
- Previous Names
-
- mtrex
- julie (1)
- skiv2l2
- wu:fd11a05
- zgc:63838
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to enable RNA helicase activity. Acts upstream of or within fin regeneration and positive regulation of cell division. Predicted to be located in nucleus. Predicted to be part of TRAMP complex. Is expressed in blastomere; nervous system; and pectoral fin. Orthologous to human MTREX (Mtr4 exosome RNA helicase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Yang et al., 2007
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Yang et al., 2007
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR011545 | DEAD/DEAH box helicase domain |
| Domain | IPR012961 | ATP-dependent RNA helicase Ski2/MTR4, C-terminal |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR025696 | Exosome RNA helicase MTR4-like, beta-barrel domain |
| Domain | IPR048392 | Exosome RNA helicase MTR4-like, stalk |
| Family | IPR016438 | ATP-dependent RNA helicase SKI2-like |
| Family | IPR050699 | RNA/DNA Helicase |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
Domain Details Per Protein
| Protein | Length | ATP-dependent RNA helicase SKI2-like | ATP-dependent RNA helicase Ski2/MTR4, C-terminal | DEAD/DEAH box helicase domain | Exosome RNA helicase MTR4-like, beta-barrel domain | Exosome RNA helicase MTR4-like, stalk | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | RNA/DNA Helicase |
|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q6P7X6
|
1034 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
mtrex-201
(1)
|
Ensembl | 3,333 nt | ||
| ncRNA |
skiv2l2-002
(1)
|
Ensembl | 535 nt |
Interactions and Pathways
No data available
Plasmids
No data available