Gene

g3bp2b

ID

ZDB-GENE-040426-2698

Name

G3BP stress granule assembly factor 2b

Symbol

g3bp2b Nomenclature History

Previous Names

wu:fj98c08
zgc:111883
zgc:56304
zgc:77426

Type

protein_coding_gene

Location

Chr: 23 Mapping Details/Browsers

Description

Predicted to have mRNA binding activity. Predicted to be involved in stress granule assembly. Predicted to localize to cytosol and ribonucleoprotein complex. Is expressed in female organism.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:56304 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With g3bp2b Human Ortholog

No data available

Associated With g3bp2b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Domain	IPR002075	Nuclear transport factor 2 domain
Domain	IPR018222	Nuclear transport factor 2, eukaryote
Domain	IPR034376	G3BP2, RNA recognition motif
Family	IPR039539	Ras GTPase-activating protein-binding protein
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR032710	NTF2-like domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	G3BP2, RNA recognition motif	NTF2-like domain superfamily	Nuclear transport factor 2 domain	Nuclear transport factor 2, eukaryote	Nucleotide-binding alpha-beta plait domain superfamily	Ras GTPase-activating protein-binding protein	RNA-binding domain superfamily	RNA recognition motif domain
UniProtKB:Q4V942 InterPro	501
UniProtKB:Q7ZV01 InterPro	461

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	g3bp2b-201 (1) Ensembl	Ensembl	5,603 nt	Select Tool ZFIN BLAST
mRNA	g3bp2b-202 (1) Ensembl	Ensembl	2,310 nt	Select Tool ZFIN BLAST
mRNA	g3bp2b-203 (1) Ensembl	Ensembl	942 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations