Gene

hdgfl2

ID

ZDB-GENE-040426-2104

Name

HDGF like 2

Symbol

hdgfl2 Nomenclature History

Previous Names

hdgfrp2 (1)
HRP2 (1)
id:ibd2069
wu:fa12c06
wu:fi26d12
zgc:66215

Type

protein_coding_gene

Location

Chr: 22 Mapping Details/Browsers

Description

Is expressed in notochord. Orthologous to human HDGFL2 (HDGF like 2).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:66215 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With hdgfl2 Human Ortholog

No data available

Associated With hdgfl2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000313	PWWP domain
Domain	IPR021567	Lens epithelium-derived growth factor, integrase-binding domain
Homologous_superfamily	IPR035441	TFIIS/LEDGF domain superfamily
Homologous_superfamily	IPR036218	HIV integrase-binding domain superfamily

Domain Details Per Protein

Protein	Length	HIV integrase-binding domain superfamily	Lens epithelium-derived growth factor, integrase-binding domain	PWWP domain	TFIIS/LEDGF domain superfamily
UniProtKB:Q5XXA7 InterPro	662
UniProtKB:A0A8M3AN22 InterPro	661

Transcripts

Genome Browsers

No data available

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations