Gene

hnrnpc

ID

ZDB-GENE-040426-2043

Name

heterogeneous nuclear ribonucleoprotein C

Symbol

hnrnpc Nomenclature History

Previous Names

fb57h12
fi16b11
wu:fb57h12 (1)
wu:fi16b11
zgc:55701

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Predicted to have RNA binding activity. Predicted to localize to nucleus. Orthologous to several human genes including HNRNPC (heterogeneous nuclear ribonucleoprotein C).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:55701 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With hnrnpc Human Ortholog

Disease Ontology Term	Multi-Species Data	OMIM Term	OMIM Phenotype ID
		Intellectual developmental disorder, autosomal dominant 74	620688

Associated With hnrnpc Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000504	RNA recognition motif domain
Family	IPR017347	Heterogeneous nuclear ribonucleoprotein C
Family	IPR051186	RRM HNRPC family, RALY subfamily
Homologous_superfamily	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily	IPR035979	RNA-binding domain superfamily

Domain Details Per Protein

Protein	Length	Heterogeneous nuclear ribonucleoprotein C	Nucleotide-binding alpha-beta plait domain superfamily	RNA-binding domain superfamily	RNA recognition motif domain	RRM HNRPC family, RALY subfamily
UniProtKB:A0A8M9Q728 InterPro	393
UniProtKB:Q803J4 InterPro	313
UniProtKB:A0A8M6Z8V1 InterPro	312
UniProtKB:A0A8M9PUR6 InterPro	392

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	hnrnpc-201 (1) Ensembl	Ensembl		1,726 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations