Gene

arl5c

ID
ZDB-GENE-040426-1866
Name
ADP-ribosylation factor-like 5C
Symbol
arl5c Nomenclature History
Previous Names
  • zgc:77751
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have GTP binding activity. Predicted to be involved in intracellular protein transport; protein localization to Golgi membrane; and vesicle-mediated transport. Predicted to localize to trans-Golgi network. Is expressed in several structures, including basal plate midbrain region; midbrain; presumptive diencephalon; segmental plate; and thymus. Orthologous to human ARL5C (ADP ribosylation factor like GTPase 5C).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With arl5c Human Ortholog
No data available
Associated With arl5c Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR005225 Small GTP-binding domain
Family IPR006689 Small GTPase superfamily, ARF/SAR type
Family IPR024156 Small GTPase superfamily, ARF type
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length P-loop containing nucleoside triphosphate hydrolase Small GTPase superfamily, ARF/SAR type Small GTPase superfamily, ARF type Small GTP-binding domain
UniProtKB:Q6P6E8 179
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA arl5c-201 (1) Ensembl 1,457 nt
ncRNA arl5c-002 (1) Ensembl 826 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations