Gene

tcea3

ID
ZDB-GENE-040426-1860
Name
transcription elongation factor A (SII), 3
Symbol
tcea3 Nomenclature History
Previous Names
  • zgc:77732 (1)
Type
protein_coding_gene
Location
Chr: 16 Mapping Details/Browsers
Description
Predicted to enable DNA binding activity; translation elongation factor activity; and zinc ion binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to act upstream of or within transcription elongation by RNA polymerase II and translational elongation. Predicted to be active in nucleus. Is expressed in adaxial cell; musculature system; neuromast; and somite. Orthologous to human TCEA3 (transcription elongation factor A3).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With tcea3 Human Ortholog
No data available
Associated With tcea3 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001222 Zinc finger, TFIIS-type
Domain IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
Domain IPR003618 Transcription elongation factor S-II, central domain
Domain IPR017923 Transcription factor IIS, N-terminal
Family IPR006289 Transcription elongation factor, TFIIS
Family IPR035100 Transcription elongation factor, IIS-type
Homologous_superfamily IPR035441 TFIIS/LEDGF domain superfamily
Homologous_superfamily IPR036575 Transcription elongation factor S-II, central domain superfamily
Domain Details Per Protein
Protein Additional Resources Length TFIIS/LEDGF domain superfamily Transcription elongation factor, IIS-type Transcription elongation factor S-II, central domain Transcription elongation factor S-II, central domain superfamily Transcription elongation factor, TFIIS Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type Transcription factor IIS, N-terminal Zinc finger, TFIIS-type
UniProtKB:A0A8M9NZ77 InterPro 745
UniProtKB:A0A8M3B1T7 InterPro 684
UniProtKB:A0A8M3AQQ8 InterPro 696
UniProtKB:A0A8M9PMD2 InterPro 686
UniProtKB:A0A8M9PD11 InterPro 765
UniProtKB:Q6P0U5 InterPro 409
UniProtKB:A0A8M2B4P3 InterPro 783
UniProtKB:A0A8M3AJ93 InterPro 524
UniProtKB:A0A8M6Z1R7 InterPro 765
UniProtKB:A0A8M3AQR4 InterPro 455
UniProtKB:A0A8M9PMC8 InterPro 747
UniProtKB:A0A8M6YSP1 InterPro 763
UniProtKB:A0A8M9P7V0 InterPro 745
UniProtKB:A0A8M3AI98 InterPro 399
UniProtKB:A0A8M9NZ73 InterPro 765
UniProtKB:A0A8M9PJD8 InterPro 747
UniProtKB:A0A8M9PD15 InterPro 709
UniProtKB:A0A8M3AJ90 InterPro 727
UniProtKB:A0A8M3ATK5 InterPro 709
UniProtKB:A0A8M3AI93 InterPro 691
UniProtKB:A0A8M3B1U0 InterPro 381
UniProtKB:A0A8M3ATL0 InterPro 496
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA tcea3-201 (1) Ensembl 1,842 nt
mRNA tcea3-202 (1) Ensembl 1,055 nt
mRNA tcea3-203 (1) Ensembl 697 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations