Gene

hpca

ID
ZDB-GENE-040426-1683
Name
hippocalcin
Symbol
hpca Nomenclature History
Previous Names
  • zgc:73126
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Human ortholog(s) of this gene implicated in torsion dystonia 2. Is expressed in hatching gland; nervous system; neural rod; and neural tube. Orthologous to human HPCA (hippocalcin).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
7 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hpca Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
torsion dystonia 2 Alliance Dystonia 2, torsion, autosomal recessive 224500
Associated With hpca Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Domain IPR002048 EF-hand domain
Family IPR028846 Recoverin family
Homologous_superfamily IPR011992 EF-hand domain pair
Domain Details Per Protein
Protein Length EF-Hand 1, calcium-binding site EF-hand domain EF-hand domain pair Recoverin family
UniProtKB:Q6PC34 193
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hpca-201 (1) Ensembl 2,361 nt
mRNA hpca-204 (1) Ensembl 3,139 nt
mRNA hpca-205 (1) Ensembl 3,238 nt
ncRNA hpca-002 (1) Ensembl 452 nt
ncRNA hpca-003 (1) Ensembl 213 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations