Gene

efhc1

ID
ZDB-GENE-040426-1300
Name
EF-hand domain (C-terminal) containing 1
Symbol
efhc1 Nomenclature History
Previous Names
  • zgc:63931 (1)
Type
protein_coding_gene
Location
Chr: 20 Mapping Details/Browsers
Description
Predicted to have alpha-tubulin binding activity. Predicted to be involved in cilium-dependent cell motility; mitotic cytokinesis; and mitotic spindle organization. Predicted to localize to axoneme and mitotic spindle. Human ortholog(s) of this gene implicated in juvenile absence epilepsy 1 and juvenile myoclonic epilepsy. Is expressed in several structures, including Kupffer's vesicle; central nervous system; forerunner cell group; neural tube; and pronephros. Orthologous to human EFHC1 (EF-hand domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
9 figures from 4 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With efhc1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
juvenile absence epilepsy 1 Alliance {Epilepsy, juvenile absence, susceptibility to, 1} 607631
juvenile myoclonic epilepsy Alliance {Myoclonic epilepsy, juvenile, susceptibility to, 1} 254770
Associated With efhc1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006602 DM10 domain
Family IPR040193 EF-hand domain-containing protein EFHC1/EFHC2/EFHB
Domain Details Per Protein
Protein Length DM10 domain EF-hand domain-containing protein EFHC1/EFHC2/EFHB
UniProtKB:Q7T2F1 554
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA efhc1-201 (1) Ensembl 2,161 nt
mRNA efhc1-202 (1) Ensembl 306 nt
mRNA efhc1-203 (1) Ensembl 306 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations