Gene

rtn4r

ID
ZDB-GENE-040310-1
Name
reticulon 4 receptor
Symbol
rtn4r Nomenclature History
Previous Names
  • NgR
  • Nogo-66 receptor
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have Roundabout binding activity and heparin binding activity. Involved in axon guidance and peripheral nervous system neuron axonogenesis. Human ortholog(s) of this gene implicated in schizophrenia. Is expressed in nervous system. Orthologous to human RTN4R (reticulon 4 receptor).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from Brösamle et al., 2009
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rtn4r Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
schizophrenia Alliance {Schizophrenia, susceptibility to} 181500
Associated With rtn4r Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000483 Cysteine-rich flanking region, C-terminal
Family IPR050541 Leucine-rich repeat and transmembrane domain-containing protein
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Cysteine-rich flanking region, C-terminal Leucine-rich repeat Leucine-rich repeat and transmembrane domain-containing protein Leucine-rich repeat domain superfamily Leucine-rich repeat, typical subtype
UniProtKB:Q6X3Y5 479
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rtn4r-201 (1) Ensembl 3,275 nt
mRNA rtn4r-202 (1) Ensembl 1,712 nt
mRNA rtn4r-203 (1) Ensembl 480 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations