Gene

pdzk1

ID

ZDB-GENE-031222-1

Name

PDZ domain containing 1

Symbol

pdzk1 Nomenclature History

Previous Names

PDZK1 (1)
pdzk1l (1)
cb1074 (1)
wu:fa55e12
wu:fb65e01

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Is expressed in gut; intestinal bulb; pronephric duct; pronephric proximal convoluted tubule; and pronephric proximal straight tubule. Orthologous to several human genes including PDZK1 (PDZ domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

9 figures from 5 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb1074 (11 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: 3 figures from Xie et al., 2021
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With pdzk1 Human Ortholog

No data available

Associated With pdzk1 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR001478	PDZ domain
Family	IPR051067	Na+/H+ exchange regulatory cofactor
Homologous_superfamily	IPR036034	PDZ superfamily

Domain Details Per Protein

Protein	Length	Na+/H+ exchange regulatory cofactor	PDZ domain	PDZ superfamily
UniProtKB:F1QTX0 InterPro	553
UniProtKB:Q08BE7 InterPro	559

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	pdzk1-201 (1) Ensembl	Ensembl		2,311 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations