Gene

btbd6b

ID

ZDB-GENE-030829-65

Name

BTB (POZ) domain containing 6b

Symbol

btbd6b Nomenclature History

Previous Names

btbd6 (1)
gacek (1)
sb:cb776
si:dkey-11b8.2
zgc:152751

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to be involved in neurogenesis. Predicted to act upstream of or within cell differentiation and nervous system development. Predicted to be located in cytoplasm and nucleus. Predicted to be active in cytosol. Is expressed in several structures, including myotome; nervous system; neural crest; neural tube; and otic vesicle. Orthologous to human BTBD6 (BTB domain containing 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

10 figures from 5 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb776 (12 images)
IMAGE:7157104 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With btbd6b Human Ortholog

No data available

Associated With btbd6b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000210	BTB/POZ domain
Domain	IPR011705	BTB/Kelch-associated
Domain	IPR012983	PHR
Domain	IPR049738	BTB/POZ domain-containing protein 6, BTB/POZ domain
Homologous_superfamily	IPR011333	SKP1/BTB/POZ domain superfamily
Homologous_superfamily	IPR038648	PHR domain superfamily

Domain Details Per Protein

Protein	Length	BTB/Kelch-associated	BTB/POZ domain	BTB/POZ domain-containing protein 6, BTB/POZ domain	PHR	PHR domain superfamily	SKP1/BTB/POZ domain superfamily
UniProtKB:A0A8M2B7L0 InterPro	535
UniProtKB:Q5TZE1 InterPro	482

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	btbd6b-201 (1) Ensembl	Ensembl	2,061 nt	Select Tool ZFIN BLAST
mRNA	btbd6b-202 (1) Ensembl	Ensembl	666 nt	Select Tool ZFIN BLAST
mRNA	btbd6b-203 (1) Ensembl	Ensembl	669 nt	Select Tool ZFIN BLAST
mRNA	btbd6b-204 (1) Ensembl	Ensembl	829 nt	Select Tool ZFIN BLAST
ncRNA	btbd6b-005 (1) Ensembl	Ensembl	816 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations