Gene

strbp

ID
ZDB-GENE-030729-18
Name
spermatid perinuclear RNA binding protein
Symbol
strbp Nomenclature History
Previous Names
  • sb:cb627 (1)
  • si:ch211-232m7.1 (1)
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have double-stranded RNA binding activity and single-stranded RNA binding activity. Predicted to be involved in spermatogenesis. Predicted to localize to nucleus. Is expressed in heart tube; nervous system; neural tube; notochord; and pharyngeal arch 3-7 skeleton. Orthologous to human STRBP (spermatid perinuclear RNA binding protein).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With strbp Human Ortholog
No data available
Associated With strbp Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR006561 DZF domain
Domain IPR014720 Double-stranded RNA-binding domain
Domain IPR044472 STRBP, first double-stranded RNA binding domain
Domain IPR049401 DZF domain, N-terminal
Domain IPR049402 DZF domain, C-terminal
Homologous_superfamily IPR043519 Nucleotidyltransferase superfamily
Domain Details Per Protein
Protein Length Double-stranded RNA-binding domain DZF domain DZF domain, C-terminal DZF domain, N-terminal Nucleotidyltransferase superfamily STRBP, first double-stranded RNA binding domain
UniProtKB:F1QB35 690
UniProtKB:A0A8M2B247 696
UniProtKB:A0A8M2B2D0 689
UniProtKB:A0A8M2B2I0 695
UniProtKB:A0A8M9QCB1 453
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA strbp-201 (1) Ensembl 2,396 nt
mRNA strbp-202 (1) Ensembl 4,681 nt
mRNA strbp-203 (1) Ensembl 757 nt
mRNA strbp-205 (1) Ensembl 4,724 nt
ncRNA strbp-002 (1) Ensembl 465 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations