Gene

cmtm6

ID

ZDB-GENE-030729-15

Name

CKLF-like MARVEL transmembrane domain containing 6

Symbol

cmtm6 Nomenclature History

Previous Names

sb:cb551 (1)
si:dkey-11p23.2
wu:fc75b06

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Is expressed in anterior axial hypoblast; mesoderm; and tail bud. Orthologous to human CMTM6 (CKLF like MARVEL transmembrane domain containing 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

6 figures from Thisse et al., 2001

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb551 (12 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With cmtm6 Human Ortholog

No data available

Associated With cmtm6 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR008253	Marvel domain
Family	IPR050578	MARVEL domain-containing and chemokine-like factor proteins

Domain Details Per Protein

Protein	Length	Marvel domain	MARVEL domain-containing and chemokine-like factor proteins
UniProtKB:Q1LYM1 InterPro	189

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	cmtm6-201 (1) Ensembl	Ensembl		2,636 nt	Select Tool
mRNA	cmtm6-202 (1) Ensembl	Ensembl		3,833 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations