Gene

acin1a

ID
ZDB-GENE-030616-583
Name
apoptotic chromatin condensation inducer 1a
Symbol
acin1a Nomenclature History
Previous Names
  • acinusa (1)
  • acinusl
  • fc12e10
  • ik:tdsubc_2g5
  • si:zc14a17.12
  • wu:fb04g06 (1)
  • wu:fb40f03
  • wu:fb68h03
  • wu:fb80f07
  • wu:fc12e10
  • xx:tdsubc_2g5
Type
protein_coding_gene
Location
Chr: 2 Mapping Details/Browsers
Description
Predicted to have nucleic acid binding activity. Orthologous to human ACIN1 (apoptotic chromatin condensation inducer 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With acin1a Human Ortholog
No data available
Associated With acin1a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR032552 Acin1, RNSP1-SAP18 binding (RSB) motif
Domain IPR003034 SAP domain
Domain IPR034257 Acinus, RNA recognition motif
Family IPR052793 Exon junction complex-associated protein
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Homologous_superfamily IPR036361 SAP domain superfamily
Domain Details Per Protein
Protein Length Acin1, RNSP1-SAP18 binding (RSB) motif Acinus, RNA recognition motif Exon junction complex-associated protein Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily SAP domain SAP domain superfamily
UniProtKB:A0A8M2BIP8 1928
UniProtKB:A0A8M2BIJ9 1929
UniProtKB:A0A8M9Q0P4 1951
UniProtKB:A0A8M2BJ22 1427
UniProtKB:A0A8M3AQD0 1426
UniProtKB:A0A8M2BIM2 1484
UniProtKB:A0A8M9PJ00 1449
UniProtKB:A0A8M9PQ02 1448
UniProtKB:A0A8M9PXD0 1950
UniProtKB:A0A8M9P831 1506
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA acin1a-202 (1) Ensembl 3,315 nt
mRNA acin1a-204 (1) Ensembl 2,378 nt
mRNA acin1a-205 (1) Ensembl 806 nt
mRNA acin1a-206 (1) Ensembl 779 nt
mRNA acin1a-207 (1) Ensembl 2,523 nt
mRNA acin1a-208 (1) Ensembl 4,158 nt
ncRNA acin1a-003 (1) Ensembl 508 nt
ncRNA acin1a-011 (1) Ensembl 803 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations