Gene

ftr82

ID
ZDB-GENE-030219-207
Name
finTRIM family, member 82
Symbol
ftr82 Nomenclature History
Previous Names
  • cb579 (1)
  • id:ibd1340
  • sb:cb579
  • si:dkey-252h13.6 (1)
  • wu:fb99c05
  • zgc:153276
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to have zinc ion binding activity. Involved in vasculature development. Is expressed in several structures, including cardiovascular system; digestive system; head mesenchyme; mesoderm; and pleuroperitoneal region.
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
16 figures from 6 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
6 figures from Chang et al., 2017
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With ftr82 Human Ortholog
No data available
Associated With ftr82 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR000315 B-box-type zinc finger
Domain IPR001841 Zinc finger, RING-type
Domain IPR001870 B30.2/SPRY domain
Domain IPR003877 SPRY domain
Domain IPR003879 Butyrophylin-like, SPRY domain
Domain IPR006574 SPRY-associated
Family IPR051051 E3 ubiquitin-protein ligase TRIM/RNF
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily IPR043136 B30.2/SPRY domain superfamily
Domain Details Per Protein
Protein Length B30.2/SPRY domain B30.2/SPRY domain superfamily B-box-type zinc finger Butyrophylin-like, SPRY domain Concanavalin A-like lectin/glucanase domain superfamily E3 ubiquitin-protein ligase TRIM/RNF SPRY-associated SPRY domain Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:Q08CC1 573
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA ftr82-201 (1) Ensembl 2,237 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations