Gene
bop1
- ID
- ZDB-GENE-030219-109
- Name
- BOP1 ribosomal biogenesis factor
- Symbol
- bop1 Nomenclature History
- Previous Names
-
- id:ibd1283 (1)
- si:ch211-251g8.2
- si:ch211-251g8.4
- zgc:154135
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to enable ribonucleoprotein complex binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and regulation of cell cycle. Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleolus and nucleoplasm. Predicted to be part of PeBoW complex and preribosome, large subunit precursor. Is expressed in head; immature eye; midbrain hindbrain boundary; optic tectum; and somite. Orthologous to human BOP1 (BOP1 ribosomal biogenesis factor).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR019775 | WD40 repeat, conserved site |
| Domain | IPR012953 | BOP1, N-terminal domain |
| Family | IPR028598 | WD repeat BOP1/Erb1 |
| Homologous_superfamily | IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| Homologous_superfamily | IPR036322 | WD40-repeat-containing domain superfamily |
| Repeat | IPR001680 | WD40 repeat |
Domain Details Per Protein
| Protein | Length | BOP1, N-terminal domain | WD40 repeat | WD40 repeat, conserved site | WD40-repeat-containing domain superfamily | WD40/YVTN repeat-like-containing domain superfamily | WD repeat BOP1/Erb1 |
|---|---|---|---|---|---|---|---|
|
UniProtKB:A0JMQ0
|
777 |
Interactions and Pathways
No data available
Plasmids
No data available