Gene

susd6

ID

ZDB-GENE-030131-8832

Name

sushi domain containing 6

Symbol

susd6 Nomenclature History

Previous Names

fk24g06
si:dkey-11e23.5
wu:fk24g06
zgc:154022

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Orthologous to human SUSD6 (sushi domain containing 6).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

No data available

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With susd6 Human Ortholog

No data available

Associated With susd6 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000436	Sushi/SCR/CCP domain
Family	IPR042866	Sushi domain-containing protein 6
Homologous_superfamily	IPR035976	Sushi/SCR/CCP superfamily

Domain Details Per Protein

Protein	Length	Sushi domain-containing protein 6	Sushi/SCR/CCP domain	Sushi/SCR/CCP superfamily
UniProtKB:A0A8M2B7I4 InterPro	360
UniProtKB:A0A8M2B7I3 InterPro	363
UniProtKB:U3JAN2 InterPro	364

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	susd6-201 (1) Ensembl	Ensembl		4,966 nt	Select Tool ZFIN BLAST
mRNA	susd6-202 (1) Ensembl	Ensembl		2,081 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations