Gene

hnrnpm

ID
ZDB-GENE-030131-6898
Name
heterogeneous nuclear ribonucleoprotein M
Symbol
hnrnpm Nomenclature History
Previous Names
  • si:ch211-197g15.1
  • wu:fa10g07 (1)
  • wu:fa98b02
Type
protein_coding_gene
Location
Chr: 22 Mapping Details/Browsers
Description
Predicted to have mRNA binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome and regulation of mRNA stability involved in response to oxidative stress. Predicted to localize to cytoplasm and post-mRNA release spliceosomal complex. Orthologous to human HNRNPM (heterogeneous nuclear ribonucleoprotein M).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2005
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With hnrnpm Human Ortholog
No data available
Associated With hnrnpm Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000504 RNA recognition motif domain
Domain IPR034990 hnRNPM, RNA recognition motif 3
Family IPR050374 RRT5/SRSF/Splicing Factor SR
Family IPR050502 Eukaryotic RNA-binding
Homologous_superfamily IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Homologous_superfamily IPR035979 RNA-binding domain superfamily
Domain Details Per Protein
Protein Length Eukaryotic RNA-binding hnRNPM, RNA recognition motif 3 Nucleotide-binding alpha-beta plait domain superfamily RNA-binding domain superfamily RNA recognition motif domain RRT5/SRSF/Splicing Factor SR
UniProtKB:A0A8M2BHT4 614
UniProtKB:A0A8M1NZJ3 686
UniProtKB:F1R2E0 715
UniProtKB:E9QEE4 701
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA hnrnpm-201 (1) Ensembl 5,187 nt
mRNA hnrnpm-202 (1) Ensembl 2,559 nt
mRNA hnrnpm-204 (1) Ensembl 703 nt
mRNA hnrnpm-206 (1) Ensembl 2,274 nt
ncRNA hnrnpm-003 (1) Ensembl 947 nt
ncRNA hnrnpm-004 (1) Ensembl 796 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations