Gene

akap1b

ID

ZDB-GENE-030131-6844

Name

A kinase (PRKA) anchor protein 1b

Symbol

akap1b Nomenclature History

Previous Names

akap1
fa08b04
wu:fa08b04 (1)

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Predicted to have RNA binding activity and protein kinase A regulatory subunit binding activity. Predicted to be involved in regulation of protein kinase A signaling. Predicted to localize to integral component of membrane and mitochondrion. Is expressed in several structures, including alar plate midbrain region; digestive system; midbrain; musculature system; and segmental plate. Orthologous to human AKAP1 (A-kinase anchoring protein 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cb434 (17 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With akap1b Human Ortholog

No data available

Associated With akap1b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR002999	Tudor domain
Domain	IPR004087	K Homology domain
Domain	IPR004088	K Homology domain, type 1
Domain	IPR047367	A-kinase anchor protein 1, Tudor domain
Domain	IPR047368	A-kinase anchor protein 1, type I K homology domain
Family	IPR050621	Tudor domain-containing
Homologous_superfamily	IPR035437	SNase-like, OB-fold superfamily
Homologous_superfamily	IPR036612	K Homology domain, type 1 superfamily

Domain Details Per Protein

Protein	Length	A-kinase anchor protein 1, Tudor domain	A-kinase anchor protein 1, type I K homology domain	K Homology domain	K Homology domain, type 1	K Homology domain, type 1 superfamily	SNase-like, OB-fold superfamily	Tudor domain	Tudor domain-containing
UniProtKB:F1RBY1 InterPro	837

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	akap1b-201 (1) Ensembl	Ensembl	6,341 nt	Select Tool ZFIN BLAST
mRNA	akap1b-204 (1) Ensembl	Ensembl	3,083 nt	Select Tool
ncRNA	akap1b-003 (1) Ensembl	Ensembl	823 nt	Select Tool
ncRNA	akap1b-004 (1) Ensembl	Ensembl	880 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations