Gene

rnf17

ID
ZDB-GENE-030131-6451
Name
ring finger protein 17
Symbol
rnf17 Nomenclature History
Previous Names
  • im:7147535
  • TDRD4 (1)
  • wu:fj98c04
Type
protein_coding_gene
Location
Chr: 9 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Is expressed in gut; pharynx; and primordial germ cell. Orthologous to human RNF17 (ring finger protein 17).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
8 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rnf17 Human Ortholog
No data available
Associated With rnf17 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR001841 Zinc finger, RING-type
Domain IPR002999 Tudor domain
Domain IPR047849 RING finger protein 17-like, fourth Tudor domain
Domain IPR047850 RING finger protein 17-like, fifth Tudor domain
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR035437 SNase-like, OB-fold superfamily
Domain Details Per Protein
Protein Length RING finger protein 17-like, fifth Tudor domain RING finger protein 17-like, fourth Tudor domain SNase-like, OB-fold superfamily Tudor domain Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:F1R3C5 1521
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnf17-201 (1) Ensembl 4,905 nt
mRNA rnf17-202 (1) Ensembl 5,055 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations